PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN15517.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 309aa    MW: 34098.8 Da    PI: 6.2632
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN15517.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.5e-1395146155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++++h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +++YI++Lq
  KHN15517.1  95 QKVSHITVERNRRKEMNENLSILRSLMPFF---YVKRGDQASIIGGVIDYINELQ 146
                 6899*************************9...9********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.69E-1392150No hitNo description
SuperFamilySSF474591.07E-1693168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.23494145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.6E-1095146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-1296157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-8100151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MDESLCDVSH DTEFGDTHFG GGDLFSILES LEDLKDFPST NNEAAVIGPT FKENEQNSKK  60
VSISSRAPQD SETEPEISPK SKRQKLSPTL VEEPQKVSHI TVERNRRKEM NENLSILRSL  120
MPFFYVKRGD QASIIGGVID YINELQQLLQ CLEAKKQRKV YNEVLSPRLV SSLRPSSLSP  180
GKPPLSPRIN LPISPRNPQP GSPYKLRLQP GYLSPTIANS PTSSASSSIN DNINELFANS  240
KSIIADVEVK FSSPHVLLKT VSLPIPGQAM RIISALEDLA LEILHVNIST ADETMLNSVT  300
IKVTVMVHT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006596286.10.0PREDICTED: transcription factor SPEECHLESS-like
SwissprotQ700C75e-83SPCH_ARATH; Transcription factor SPEECHLESS
TrEMBLA0A0B2Q6R50.0A0A0B2Q6R5_GLYSO; Transcription factor SPEECHLESS
STRINGGLYMA14G31385.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36863463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.12e-44bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]